Insertion junction: CLIP2.027040_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.027040
Chromosome:chromosome 6
Location:7451691
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g300600 (1 of 19) PTHR31251:SF1 - SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 10-RELATED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAGGCGCGCCGCCGCCAGGGCCATTATGGTACGGTTGCTGGTGCGGGTGC
Internal bar code:AGAATGGTTGTGGCGAGTATGG

Confirmation - LEAP-Seq

LEAP-Seq distance:3458
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:46
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:46

Suggested primers for confirmation by PCR

Suggested primer 1:GGGAGCTATCAGCCCATGTC
Suggested primer 2:GTTGTTGTTGTAGCCCAGCG