Insertion junction: CLIP2.027050_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.027050
Chromosome:chromosome 7
Location:5543262
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g351700 (1 of 1) PTHR19315:SF9 - ER MEMBRANE PROTEIN COMPLEX SUBUNIT 4 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGTAAAGGGCTAATCGTGCATCTGCCGTACCACCAGCACGCAGCGCGCC
Internal bar code:TTGAGGGTTACGCCGGTGGCTC

Confirmation - LEAP-Seq

LEAP-Seq distance:1520
LEAP-Seq percent confirming:90.0
LEAP-Seq n confirming:18
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:20

Suggested primers for confirmation by PCR

Suggested primer 1:ATACCCGACCGGAAGTCTCA
Suggested primer 2:TTCAAGCTCGACACCAGTCC