Insertion junction: CLIP2.027051_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.027051
Chromosome:chromosome 10
Location:903688
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g424000 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACGGGGAGGAGGTCGAGCAAGGCAGCCCCGCTCGCCACAACCAAGGCGAT
Internal bar code:AGATGTGAGCCGTGAGCTATCC

Confirmation - LEAP-Seq

LEAP-Seq distance:1193
LEAP-Seq percent confirming:90.9091
LEAP-Seq n confirming:30
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:33

Suggested primers for confirmation by PCR

Suggested primer 1:CACGTCCTCCAGCTTGTTCT
Suggested primer 2:GGAACCGGAGACACAAGGAG