Insertion junction: CLIP2.027054_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.027054
Chromosome:chromosome 7
Location:1783810
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g325724 PTP1 Protein tyrosine phosphatase 1; (1 of 1) K18078 - protein tyrosine phosphatase domain-containing protein 1 [EC:3.1.3.-] (PTPDC1) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TATGCAGTAGGTCAGACAGGGTCGGAAACGGAGAAAGGACAAGGGTTGGG
Internal bar code:ATCCTAGGATGACGTTCGAGCC

Confirmation - LEAP-Seq

LEAP-Seq distance:2215
LEAP-Seq percent confirming:95.0
LEAP-Seq n confirming:19
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:20

Suggested primers for confirmation by PCR

Suggested primer 1:GCATTGTGCACGTTGACTGT
Suggested primer 2:TACAAGGCAGTGCGTACGTT