Insertion junction: CLIP2.027055_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.027055
Chromosome:chromosome 17
Location:2291516
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g713400 HTA31,HTA22,HTA25 Histone H2A; (1 of 30) K11251 - histone H2A (H2A) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCAGCGGTAAGGTACTCCAGCACAGCGGCCAGGTACACGGGCGCGCCGGC
Internal bar code:TGTTGTCCTCTGCGTGCTAACT

Confirmation - LEAP-Seq

LEAP-Seq distance:5089
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:72
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:72

Suggested primers for confirmation by PCR

Suggested primer 1:GAGCGGTTGTTTGACCCAAC
Suggested primer 2:TTTCTGGGAAGGACCGAAGC