Insertion junction: CLIP2.027057_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.027057
Chromosome:chromosome 9
Location:1269685
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g400851 (1 of 781) IPR000104 - Antifreeze protein, type I CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCTGGCAGTGCGGCAGGCGTGGCAGGCGCTGCTGCGGGCGACCCGGACG
Internal bar code:GAAAGAAGAAGTATCGCTAAGT

Confirmation - LEAP-Seq

LEAP-Seq distance:3425
LEAP-Seq percent confirming:98.6111
LEAP-Seq n confirming:71
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:72

Suggested primers for confirmation by PCR

Suggested primer 1:AGATAAACTGCCAGCACCCC
Suggested primer 2:AGCCTTCGGTTGTACAGCTC