Insertion junction: CLIP2.027065_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.027065
Chromosome:chromosome 6
Location:8151326
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g305950 CSB32,TNP18 (1 of 70) PF07282 - Putative transposase DNA-binding domain (OrfB_Zn_ribbon); {"Probable transposon-derived protein of Chlamydomonas-Specific family B intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCAGACCTGCTACAACTGCGGGTGTCAGGAGATGGCCATCAAGCGGCTT
Internal bar code:AGCAGTAGCGGCTATCACTGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:2552
LEAP-Seq percent confirming:90.4762
LEAP-Seq n confirming:38
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:42

Suggested primers for confirmation by PCR

Suggested primer 1:CGTTATCAACCCAGCCACCT
Suggested primer 2:GGGCCGATTCCATATGAGCA