Insertion junction: CLIP2.027071_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.027071
Chromosome:chromosome 9
Location:6733939
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g417050 (1 of 12) IPR008928 - Six-hairpin glycosidase-like intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGTTGATGACATCATAGCGGCATTCAGTTCAAACTTAGGATGAGCATGAG
Internal bar code:ACTTCGAACGGTGTCGCACCGG

Confirmation - LEAP-Seq

LEAP-Seq distance:4027
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:105
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:105

Suggested primers for confirmation by PCR

Suggested primer 1:CAGCTGCGTGCATGTGATAC
Suggested primer 2:TGTGCAGAGGACGAAGCAAT