Insertion junction: CLIP2.027074_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.027074
Chromosome:chromosome 1
Location:6671698
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g047500 (1 of 21) IPR001611//IPR003591 - Leucine-rich repeat // Leucine-rich repeat, typical subtype intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGAACCCCTCGTTCCCCTTGCACGTTACTAACACACCCGCGCTGCAAAC
Internal bar code:CCTTTTAAAATAGTAATGCCTG

Confirmation - LEAP-Seq

LEAP-Seq distance:2814
LEAP-Seq percent confirming:94.1176
LEAP-Seq n confirming:32
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:34

Suggested primers for confirmation by PCR

Suggested primer 1:CTCATGCTGCAATCCCATGC
Suggested primer 2:GTGTGTGTGTGTGCTTCGTC