Insertion junction: CLIP2.027106_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.027106
Chromosome:chromosome 3
Location:6035552
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g189950 HOP1,HOP HSP70-HSP90 organizing protein; (1 of 1) K09553 - stress-induced-phosphoprotein 1 (STIP1) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATATGGCAGCGCAAAGATGCGGTGTTGGGGTTGAGGTTGGTGCCAGTTAT
Internal bar code:TTCCATCCGGGCATTGGCGCTG

Confirmation - LEAP-Seq

LEAP-Seq distance:3212
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:66
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:66

Suggested primers for confirmation by PCR

Suggested primer 1:GGCCCTTGTTGTACGTCTCA
Suggested primer 2:CGTCGGCCGGACCATTATAA