Insertion junction: CLIP2.027111_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.027111
Chromosome:chromosome 3
Location:9121394
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g200767 CSR9 (1 of 1) IPR012884//IPR027417 - Excisionase-like // P-loop containing nucleoside triphosphate hydrolase; Carbohydrate sulfotransferase-related 9 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGAAGGACACACAGGAACCGTACAATACTGCCCCCCCTCTTACTTGCCCC
Internal bar code:TGTTAGCTTCACTTCGGCATCG

Confirmation - LEAP-Seq

LEAP-Seq distance:1902
LEAP-Seq percent confirming:97.561
LEAP-Seq n confirming:40
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:41

Suggested primers for confirmation by PCR

Suggested primer 1:ATGCTTGATGCGCCGATTTC
Suggested primer 2:AGGTAGATAGTGTGGGGCGT