Insertion junction: CLIP2.027144_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.027144
Chromosome:chromosome 11
Location:1366719
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g467711 (1 of 3) PTHR30612 - SECA INNER MEMBRANE COMPONENT OF SEC PROTEIN SECRETION SYSTEM intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTTCTTAGGGCGCCAGCGGCGGCACGGGGTCAGGGATGGGTGTTTGCCCA
Internal bar code:CAGGGTCTACGCTCTTGGCAGC

Confirmation - LEAP-Seq

LEAP-Seq distance:180
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:GCGCCTTAGTCATCTGGTCC
Suggested primer 2:TCCAAAAGAGCCGCCCTAAG