Insertion junction: CLIP2.027153_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.027153
Chromosome:chromosome 2
Location:7657704
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g147550 (1 of 2) IPR009057//IPR017877 - Homeodomain-like // Myb-like domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCCCACCAGCCTTCATTGCTCGTCGCCAGTGTCCTTGGTCCCAGCCACC
Internal bar code:CTGGTTGGCGAGAACATGTGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:130
LEAP-Seq percent confirming:91.6667
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:CCCGGCTAAGCGTATCATGT
Suggested primer 2:GAGACCTCTGTTGCGACCAA