Insertion junction: CLIP2.027157_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.027157
Chromosome:chromosome 7
Location:1254614
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g321850 (1 of 1) PTHR13009//PTHR13009:SF5 - HEAT SHOCK PROTEIN 90 HSP90 CO-CHAPERONE AHA-1 // SUBFAMILY NOT NAMED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTGCACCCGTTGCCCGACCCCGCCGGCCCCCACACATGACCCTGTGCCC
Internal bar code:TATGGGGCGGGTTGGAGTGCGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1675
LEAP-Seq percent confirming:54.8387
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:14
LEAP-Seq n unique pos:31

Suggested primers for confirmation by PCR

Suggested primer 1:TTTGTGCGCATGTGTGTCTG
Suggested primer 2:TTGAGCTCCTCCAACAGCTG