Insertion junction: CLIP2.027172_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.027172
Chromosome:chromosome 13
Location:2711773
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g581801 (1 of 1) PTHR13198//PTHR13198:SF4 - RING FINGER PROTEIN 25 // E3 UBIQUITIN-PROTEIN LIGASE RNF25 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACAGGTGTGCCTGTCGAAAGGGACGCAGGGTTGCGTGTAGGAGATGCGGT
Internal bar code:ATGGGATTCTCGAGTTATTGAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1586
LEAP-Seq percent confirming:97.3684
LEAP-Seq n confirming:37
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:38

Suggested primers for confirmation by PCR

Suggested primer 1:TTTACGATCCCCTCCCCCAT
Suggested primer 2:ATTGGCAGCTTGCTGGGTAT