Insertion junction: CLIP2.027173_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.027173
Chromosome:chromosome 16
Location:1663143
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g654550 (1 of 5) 1.14.11.27 - [Histone H3]-lysine-36 demethylase / JmjC domain-containing histone demethylase 1A CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCGGACTGCTACAGCCAGGGCAACACCAACGGCTGTACGGGCCCTAGCGG
Internal bar code:AGACGCGGGGAGGGTAACCCCC

Confirmation - LEAP-Seq

LEAP-Seq distance:2406
LEAP-Seq percent confirming:75.9259
LEAP-Seq n confirming:41
LEAP-Seq n nonconfirming:13
LEAP-Seq n unique pos:54

Suggested primers for confirmation by PCR

Suggested primer 1:CATGGTGGGCTTGTTGTTGG
Suggested primer 2:CAGGCTCAGGTCCGAAGAAG