Insertion junction: CLIP2.027175_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.027175
Chromosome:chromosome 8
Location:4250271
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g384250 SNRK2O (1 of 587) 2.7.11.1 - Non-specific serine/threonine protein kinase / Threonine-specific protein kinase; snRK1 family in Chlamydomonas, subgroup 2 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGGGGCCCGAGTAGCGCGCCGCGTGGCTGGCGGTGATCACCTCTGTAGG
Internal bar code:TTCATTTCGGTACAGCTGCGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:1791
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:61
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:61

Suggested primers for confirmation by PCR

Suggested primer 1:AGATCACCGACCTGCTTGTG
Suggested primer 2:GGGAGGATTACGAGCCCATG