Insertion junction: CLIP2.027177_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.027177
Chromosome:chromosome 10
Location:274014
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g419550 (1 of 1) PTHR28141//PTHR28141:SF1 - FAMILY NOT NAMED // 2',3'-CYCLIC-NUCLEOTIDE 3'-PHOSPHODIESTERASE CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCGTAGCAGACGGAGCTGCTAAGGCAGGCGCGCGGTCTGACCAGCACCG
Internal bar code:GAAGTTTGTAAGGAAGCGTTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1462
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:AATCCCTACCCTCTCCCACC
Suggested primer 2:CTCCCGTAGTATGCGTGTCC