Insertion junction: CLIP2.027177_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.027177
Chromosome:chromosome 10
Location:274015
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g419550 (1 of 1) PTHR28141//PTHR28141:SF1 - FAMILY NOT NAMED // 2',3'-CYCLIC-NUCLEOTIDE 3'-PHOSPHODIESTERASE CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTCACAAGAGCCTGAGGTCTCCGGAAACTGTCCCCAAGGTCAAAGGCAGC
Internal bar code:CCGGTCACTACCTTCAAAGAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:8814
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:87
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:87

Suggested primers for confirmation by PCR

Suggested primer 1:CTCCCGTAGTATGCGTGTCC
Suggested primer 2:AATCCCTACCCTCTCCCACC