Insertion junction: CLIP2.027183_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.027183
Chromosome:chromosome 1
Location:6719312
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g048000 TPM1 Tropomyosin 1 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTCTTTGCATGCAGGACGAGTCGAAGCGGGCCGCGCTGGAGCTGGAGTC
Internal bar code:TCCGGCTCTCGAGATTCCACAA

Confirmation - LEAP-Seq

LEAP-Seq distance:3665
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:63
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:63

Suggested primers for confirmation by PCR

Suggested primer 1:TGTCCAACGCACGTACATGA
Suggested primer 2:CACACGTCTACAGGCCAACT