Insertion junction: CLIP2.027185_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.027185
Chromosome:chromosome 3
Location:6717791
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g195950 (1 of 7) PTHR11584:SF381 - PROTEIN PQN-80, ISOFORM B CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGCTGTGGCTTGGCCTGCAGGTTGGCAGCCTGCACGTAGGAAAGGGGGC
Internal bar code:TCCTCACGTCGAGAGTTTGGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:3512
LEAP-Seq percent confirming:80.0
LEAP-Seq n confirming:32
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:40

Suggested primers for confirmation by PCR

Suggested primer 1:TCAGTGCTTCTGATGCTGCA
Suggested primer 2:AAGTCAGGAACTCGAGCACG