Insertion junction: CLIP2.027186_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.027186
Chromosome:chromosome 9
Location:3550354
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g396549 (1 of 12) IPR001841//IPR002110//IPR020683 - Zinc finger, RING-type // Ankyrin repeat // Ankyrin repeat-containing domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGTCGCGGAAAGAGTGTGCGTGGCCCGGTCAACGGCCACCCCTCCCCCC
Internal bar code:TTAAAACTCGGTTGTAAGGGCG

Confirmation - LEAP-Seq

LEAP-Seq distance:3509
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:AGAGCTGGAGGAAGGAGAGG
Suggested primer 2:ATGAGGTGAACTTCTGGCCG