Insertion junction: CLIP2.027190_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.027190
Chromosome:chromosome 6
Location:963252
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g256500 (1 of 2) PTHR14187//PTHR14187:SF5 - ALPHA KINASE/ELONGATION FACTOR 2 KINASE // SUBFAMILY NOT NAMED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAGTACGCCTGGTCCTCTCGATTCATGATCTTTTGCGGGTAACCGAAAAT
Internal bar code:ATCGAGCGAAATAATGATAGCG

Confirmation - LEAP-Seq

LEAP-Seq distance:2239
LEAP-Seq percent confirming:90.625
LEAP-Seq n confirming:29
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:32

Suggested primers for confirmation by PCR

Suggested primer 1:CGATGCATGCACACGAGAAG
Suggested primer 2:CCTACCGGACTTCACCAACC