Insertion junction: CLIP2.027198_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.027198
Chromosome:chromosome 9
Location:3402671
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g395732 (1 of 5) IPR000104//IPR001623 - Antifreeze protein, type I // DnaJ domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGGGCGGCGCGCGGGCACGGTCGGCTTACGACGCAGCACCAGCAAGCCC
Internal bar code:GTAGCTCTTTACAATATTCTTA

Confirmation - LEAP-Seq

LEAP-Seq distance:3015
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:CAGAGGAGCTGCCATTGGAA
Suggested primer 2:CAAAGGCAGGCAACAACTCC