Insertion junction: CLIP2.027200_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.027200
Chromosome:chromosome 5
Location:288900
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g800513 (1 of 125) IPR001841 - Zinc finger, RING-type intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCTAGCAATAGCTGCTGCGCCTAGCTAAGGCGCCAGTCCGCGTCAGTCC
Internal bar code:ATGATCGAGGGACCTATCCTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1784
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:51
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:51

Suggested primers for confirmation by PCR

Suggested primer 1:GGCACATAGATAGCGAGCGT
Suggested primer 2:CACTACAGGCACACTCAGCA