Insertion junction: CLIP2.027200_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.027200
Chromosome:chromosome 5
Location:288910
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g800513 (1 of 125) IPR001841 - Zinc finger, RING-type intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATTGCTAGGGGCTCCCGTGTGGGACTCCTCAGTACCGTGGGCTGCTTTGA
Internal bar code:ATACAGCAGTTCTTCAGATCTT

Confirmation - LEAP-Seq

LEAP-Seq distance:5335
LEAP-Seq percent confirming:96.3636
LEAP-Seq n confirming:53
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:55

Suggested primers for confirmation by PCR

Suggested primer 1:CACTACAGGCACACTCAGCA
Suggested primer 2:GGCACATAGATAGCGAGCGT