Insertion junction: CLIP2.027208_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.027208
Chromosome:chromosome 12
Location:6550824
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g538200 (1 of 1) PTHR23305//PTHR23305:SF1 - GTP-BINDING PROTEIN-RELATED // SUBFAMILY NOT NAMED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAACACCAGTCCACCCAAACACGAAATTCCTTGCCGTGCCCTGCTCCACA
Internal bar code:TTCTTACTAAAGCAGCAACTAC

Confirmation - LEAP-Seq

LEAP-Seq distance:1968
LEAP-Seq percent confirming:90.625
LEAP-Seq n confirming:29
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:32

Suggested primers for confirmation by PCR

Suggested primer 1:GAAAGGAGCAGTGGTCGTGA
Suggested primer 2:GTGTGTCGGCTGGGACTTTA