Insertion junction: CLIP2.027212_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.027212
Chromosome:chromosome 12
Location:3126717
Confidence (%):80
Locus systematic id Locus common name Defline Feature
lncRNA_TCONS_00075855

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTTACACGAAACGGGTCTTTTTACTTCTGACTTGCCTTTAAAAAATGTG
Internal bar code:GACGGTGATAATGTGTATGGCG

Confirmation - LEAP-Seq

LEAP-Seq distance:2963
LEAP-Seq percent confirming:93.5484
LEAP-Seq n confirming:58
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:62

Suggested primers for confirmation by PCR

Suggested primer 1:TGCTAACCCGCAGCTAACAA
Suggested primer 2:CACGCCGATGCATTGAGAAG