Insertion junction: CLIP2.027213_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.027213
Chromosome:chromosome 16
Location:7132577
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g676197 RPN1 (1 of 1) K03028 - 26S proteasome regulatory subunit N1 (PSMD2, RPN1); 26S proteasome regulatory subunit intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCTGACCAGTCACCCTCACCATTGTCGCGCACCCTGCTCACGGCTACAC
Internal bar code:CGGAGATTAGCTTGGTCCGGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:655
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:TTGTCTTGTCCTGCGTCCTC
Suggested primer 2:CGGACAATATGCCAGCGTTG