Insertion junction: CLIP2.027221_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.027221
Chromosome:chromosome 3
Location:1522810
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g151850 (1 of 1) PF06884 - Protein of unknown function (DUF1264) (DUF1264) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCGCGGTGCCGCTGCCATCGGTGGCATTGCTGCCAGTGCCCTTCGGCGG
Internal bar code:TTATATAACTGGTTTTCATTCA

Confirmation - LEAP-Seq

LEAP-Seq distance:1008
LEAP-Seq percent confirming:90.9091
LEAP-Seq n confirming:20
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:AATTGCGCTGACTGGTGAGA
Suggested primer 2:TGTACTCGATGCCGATCAGC