Insertion junction: CLIP2.027229_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.027229
Chromosome:chromosome 17
Location:6482861
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g744447 (1 of 1) 3.6.3.7 - Sodium-exporting ATPase / Sodium-translocating P-type ATPase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAAAGCCTGGGGAGAGGAGGGGAGGGAGGGAGGGGTTTAACAGGGGTTTA
Internal bar code:AGGCACATGCGCGGCCGTGGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:176
LEAP-Seq percent confirming:62.5
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:GGGAGTGAGGCGTTCTGAAA
Suggested primer 2:ATCTACACCCCTTCCCCCTC