Insertion junction: CLIP2.027231_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.027231
Chromosome:chromosome 7
Location:5478849
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g351050 VPS23 (1 of 1) K12183 - ESCRT-I complex subunit TSG101 (TSG101, STP22, VPS23); Subunit of the ESCRT-I complex intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGCGCCCCCCCGGCCACCCCCACCTGCAGCGCCTTGTTCTTGGCCGCCAG
Internal bar code:TCTGACCAGGGTCAATTTTTTT

Confirmation - LEAP-Seq

LEAP-Seq distance:1284
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:GTAACCAGCAGCAGCAACAG
Suggested primer 2:TTACACACACCTGCGTCTCC