Insertion junction: CLIP2.027231_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.027231
Chromosome:chromosome 7
Location:5478856
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g351050 VPS23 (1 of 1) K12183 - ESCRT-I complex subunit TSG101 (TSG101, STP22, VPS23); Subunit of the ESCRT-I complex intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCATGACCAGTATTATGGGTTCCGGGGTTTGTGCCCAGTAGCCTGAGTAG
Internal bar code:TGCGTCTTACTCTCTTTAATTG

Confirmation - LEAP-Seq

LEAP-Seq distance:3827
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:80
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:80

Suggested primers for confirmation by PCR

Suggested primer 1:TTACACACACCTGCGTCTCC
Suggested primer 2:GTAACCAGCAGCAGCAACAG