Insertion junction: CLIP2.027235_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.027235
Chromosome:chromosome 9
Location:5873090
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g411850 (1 of 2) PTHR23130:SF61 - DEFENSE PROTEIN L(2)34FC intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCACGAGGAGGATAGAGGGAAGAGGGGAGGGCAGGTACGGGGAGATGGA
Internal bar code:TGTTCACGGTTCATTACGTTTT

Confirmation - LEAP-Seq

LEAP-Seq distance:128
LEAP-Seq percent confirming:77.7778
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:TTTGGGGTGGTATGATGGCC
Suggested primer 2:TGATTGCAGTTGGTTTGCGG