Insertion junction: CLIP2.027235_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.027235
Chromosome:chromosome 9
Location:5873093
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g411850 (1 of 2) PTHR23130:SF61 - DEFENSE PROTEIN L(2)34FC intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCCGCCGCCAACAGTCGGGCGGCGTGCGGCCCGACCCCGGCGCGCCCCGC
Internal bar code:TGTTCACGGTTCATTACGTTTT

Confirmation - LEAP-Seq

LEAP-Seq distance:4299
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:81
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:81

Suggested primers for confirmation by PCR

Suggested primer 1:TGATTGCAGTTGGTTTGCGG
Suggested primer 2:TTTGGGGTGGTATGATGGCC