Insertion junction: CLIP2.027236_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.027236
Chromosome:chromosome 16
Location:1129014
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g649833 (1 of 1) IPR001841//IPR003903 - Zinc finger, RING-type // Ubiquitin interacting motif intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTTATAAGGATGCGGATTACAATTGAAGGGACAGCCCGACAAGCGGGGGC
Internal bar code:AGATGAAGTGCACCTCGCGGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:2517
LEAP-Seq percent confirming:86.9565
LEAP-Seq n confirming:40
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:46

Suggested primers for confirmation by PCR

Suggested primer 1:TCGTTATCGTGCTTGCAGGT
Suggested primer 2:TCCAACGTGCGATTTAGGCT