Insertion junction: CLIP2.027237_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.027237
Chromosome:chromosome 12
Location:6341008
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g537000 (1 of 1) PF02041 - Auxin binding protein (Auxin_BP) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTTCAATCTTCCAACTCCTGCTACGAGCACCCGGGCACCTCCAACGCACG
Internal bar code:CAAGCCGGTCAACAGGCGTTCT

Confirmation - LEAP-Seq

LEAP-Seq distance:549
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:TGTGCTTCGGCTTCGATTCT
Suggested primer 2:GTGAGTGAGGGGCTGTGTAC