Insertion junction: CLIP2.027238_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.027238
Chromosome:chromosome 3
Location:4533186
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g800334 (1 of 34) IPR003072 - Orphan nuclear receptor, NOR1 type intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGCATGGCGCCACTGCTTCACCGCTCGGGCTGCATCGCCCGACCTCAGCA
Internal bar code:CATGAAAGAATAAACTCAGATT

Confirmation - LEAP-Seq

LEAP-Seq distance:313
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:CCCCACGTTGAAGCAGTACT
Suggested primer 2:ACCACTACCTGTGCTTCACG