Insertion junction: CLIP2.027242_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.027242
Chromosome:chromosome 3
Location:5780473
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g187650 (1 of 5) PF04884 - Vitamin B6 photo-protection and homoeostasis (DUF647) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCGCCGCCAGGCTCTCACACACCACAGCCAGCAACGGCCCCTGCCCCGCC
Internal bar code:TGTTTGCTGAGTTAGTTTAGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:341
LEAP-Seq percent confirming:18.1818
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:TGCGATCCTTTGACGGTGAA
Suggested primer 2:GTTTTGGCAGGAAGGGCTTG