Insertion junction: CLIP2.027245_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.027245
Chromosome:chromosome 8
Location:3214632
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g376740 (1 of 1) IPR008979//IPR018392 - Galactose-binding domain-like // LysM domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGCGGCGTGTCGTAGCCCAGCTCAATCGTGAGGAAGGCGGGGTTGGAGCC
Internal bar code:ATTGGCGTATTGTATGATACA

Confirmation - LEAP-Seq

LEAP-Seq distance:1136
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:AATGTAACCGGGCCGTCAAT
Suggested primer 2:ATCGCTCCGAGTGTGTTGTT