Insertion junction: CLIP2.027246_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.027246
Chromosome:chromosome 17
Location:1567573
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g707200 LIC2 (1 of 5) PF02931 - Neurotransmitter-gated ion-channel ligand binding domain (Neur_chan_LBD); Ligand-gated ion channel intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACACAAAAAGGTTAGATGCTGGGATGCAAAGTGTTTGGAGATTTCTGGGA
Internal bar code:ATGCTCAACAATGTGTACATTC

Confirmation - LEAP-Seq

LEAP-Seq distance:1504
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:TTCAGCACCTCGGAGAACAC
Suggested primer 2:TAGTCCACAGCGTGACCAAC