Insertion junction: CLIP2.027254_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.027254
Chromosome:chromosome 15
Location:371748
Confidence (%):80
Locus systematic id Locus common name Defline Feature
lncRNA_TCONS_00212865

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGTGCTGACGGTCACTGAGACAGCACTCCGCTAATTTAGTCTGCTCCGGG
Internal bar code:AAAAAAATGCGTCGATTCGTAG

Confirmation - LEAP-Seq

LEAP-Seq distance:3144
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:55
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:55

Suggested primers for confirmation by PCR

Suggested primer 1:CTGGGGTCATCTACGGATGC
Suggested primer 2:GCTATCACGCTGTGCCATTG