Insertion junction: CLIP2.027258_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.027258
Chromosome:chromosome 2
Location:4844824
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g109333 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGAGAGGCGGAACAGGCGAACCCCCTGCAGAATGCCCGGCCCGGGCCTTC
Internal bar code:GGCGCTAGGCCACGAAGCGATA

Confirmation - LEAP-Seq

LEAP-Seq distance:2076
LEAP-Seq percent confirming:96.4286
LEAP-Seq n confirming:27
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:28

Suggested primers for confirmation by PCR

Suggested primer 1:GGCGATATGTGCAGGTCGTA
Suggested primer 2:ATGTCAGTCACTCTTGCGCA