Insertion junction: CLIP2.027260_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.027260
Chromosome:chromosome 12
Location:8871889
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g546200 RBL5 Rhomboid-like protein; (1 of 4) PTHR22936//PTHR22936:SF32 - RHOMBOID-RELATED // SUBFAMILY NOT NAMED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCATCAGCGCTGCTTAGTGGCGCACCTGGCCATCGCATCGCAGCCGGACC
Internal bar code:GTGGCCCCGGTGGTGACCCAGA

Confirmation - LEAP-Seq

LEAP-Seq distance:1348
LEAP-Seq percent confirming:97.2222
LEAP-Seq n confirming:35
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:36

Suggested primers for confirmation by PCR

Suggested primer 1:GTGCGTGACTCCGGTATAGG
Suggested primer 2:CTCGCGGCTCATAATGGTCT