Insertion junction: CLIP2.027266_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.027266
Chromosome:chromosome 9
Location:1396343
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g400100 (1 of 1) PTHR10634 - AN1-TYPE ZINC FINGER PROTEIN intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGACTCAGCGTAAAGCGAGCTAGGGCTACAAGCGGACGGGAGTCCGCGGT
Internal bar code:AGTTTAGGTCGTCAATGAAGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:1947
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:18
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:CAGTAATTGACACGCGCTCG
Suggested primer 2:AGCATCCGCGAAGTACTACG