Insertion junction: CLIP2.027267_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.027267
Chromosome:chromosome 1
Location:3294069
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g021150 TRMC2,TMU1 (1 of 2) 2.1.1.35 - tRNA (uracil(54)-C(5))-methyltransferase / tRNA:m(5)U(54)-methyltransferase; tRNA (uracil-5-)-methyltransferase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGTGGGGTCTGAATATGTTCCCCTCACTCATGCGGCCGAGTTAGCTGCT
Internal bar code:GGATATGTTTGTCCGTGGGGCA

Confirmation - LEAP-Seq

LEAP-Seq distance:4173
LEAP-Seq percent confirming:86.9565
LEAP-Seq n confirming:20
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:23

Suggested primers for confirmation by PCR

Suggested primer 1:TGTCCAAACCGACATGCGTA
Suggested primer 2:GGGGGCAGTTCATTCGAGAA