Insertion junction: CLIP2.027278_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.027278
Chromosome:chromosome 2
Location:5783549
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g116950 HDA1 RPD3/HDA1 type histone deacetylase; (1 of 2) 3.5.1.4 - Amidase / Acylase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TACACATACACATACATGCCCACACACGCGTGTGCGCACTGCTTACAGGC
Internal bar code:TAAAGTTTCTCAAATGGGTTAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1843
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:AATGCAGAGAGGGGAACAGC
Suggested primer 2:GACGGGATGGACGGATGTAC