Insertion junction: CLIP2.027281_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.027281
Chromosome:chromosome 17
Location:4350998
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g730450 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AATGGCAGTTGTGGAGGCAGTGGAACTTGCACCCACGATGGCGGCAGCGG
Internal bar code:GACGCTTTATTCGCATTGTGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1874
LEAP-Seq percent confirming:55.5556
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:12
LEAP-Seq n unique pos:27

Suggested primers for confirmation by PCR

Suggested primer 1:CAAGTCTGCTGTTGCTTGGG
Suggested primer 2:GATGGAGAGCTCGGCAGATC