Insertion junction: CLIP2.027283_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.027283
Chromosome:chromosome 3
Location:3814854
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g169950 (1 of 1) PF02373//PF02375 - JmjC domain, hydroxylase (JmjC) // jmjN domain (JmjN) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGGCACTGGCACCATGTGCTGGCCTGCAGCGCCGCCGTGCTGTGCCTGA
Internal bar code:ACATACATGTCCTTTTTTGTAA

Confirmation - LEAP-Seq

LEAP-Seq distance:1560
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:CACCCGCACGTAGATGATCA
Suggested primer 2:CAACTCACGGGTGCAAAGTG