Insertion junction: CLIP2.027303_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.027303
Chromosome:chromosome 2
Location:3256826
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g097227 Found in Chlamydomonas and Volvox but not strongly conserved elsewhere intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGGATGGTGTGTATCAAATATGAAGTGAAGTGCCGACGTCCAGAGGTAC
Internal bar code:GGTGCACAAACAGTTTTAACCA

Confirmation - LEAP-Seq

LEAP-Seq distance:841
LEAP-Seq percent confirming:38.8889
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:11
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:GTAGGGACTCACCACCTTGC
Suggested primer 2:TGTGTATCAGGGGAGGGGAG